首都医科大学学报 ›› 2009, Vol. 30 ›› Issue (6): 821-826.doi: 10.3969/j.issn.1006-7795.2009.06.022

• 基础研究 • 上一篇    下一篇

SYBRGreenⅠ实时荧光定量PCR检测人c-myc基因方法的建立

孙秀静1, 朱圣韬2, 徐有青1, 张澍田2   

  1. 1. 首都医科大学附属北京天坛医院消化内科;2. 首都医科大学附属北京友谊医院消化内科
  • 收稿日期:2009-04-07 修回日期:1900-01-01 出版日期:2009-12-21 发布日期:2009-12-21
  • 通讯作者: 孙秀静

A Sensitive and Specific Method of Real-time Fluorescence Quantitative Polymerase Chain Reaction Using SYBR GreenⅠ for Detection of c-myc Gene

SUN Xiu-jing1, ZHU Sheng-tao2, XU You-qing1, ZHANG Shu-tian2   

  1. 1. Department of Gastroenterology, Beijing Tiantan Hospital, Capital Medical University;2. Department of Gastroenterology, Beijing Friendship Hospital, Capital Medical University
  • Received:2009-04-07 Revised:1900-01-01 Online:2009-12-21 Published:2009-12-21

摘要: 目的 构建含有c-myc基因的重组质粒并以其为模板,建立以SYBR GreenⅠ染料为荧光指示剂的实时荧光定量PCR(FQ-PCR)技术检测c-myc的标准曲线,为FQ-PCR准确检测c-myc奠定基础。方法 用反转录聚合酶链反应(RT-PCR)法从人食管鳞癌组织的总mRNA中反转录扩增c-myc cDNA,将纯化的PCR产物与pGEM-T Easy载体进行连接,转化宿主菌DH-5α,然后挑选阳性克隆重组质粒,分别用PCR扩增、限制性核酸内切酶EcoRⅠ酶切进行鉴定并测序分析。用紫外分光光度计测质粒浓度,计算拷贝数制备FQ-PCR浓度梯度标准品。最后对质粒标准品进行FQ-PCR检测。结果 PCR扩增、酶切鉴定及测序分析均证实c-myc重组到pGEM-T Easy 载体上。建立了人c-myc标准曲线,其对数与相应的Ct值(循环阈值)具有良好的相关性,相关系数2=-0.99~-1,斜率为-3.1~-3.6。结论 所构建的人c-myc质粒标准品应用SYBR GreenⅠ荧光染料技术建立的标准曲线线性关系好,灵敏性和特异性高,准确可靠,此方法可作为FQ-PCR检测c-myc基因的标准方法。

关键词: SYBR GreenⅠ染料, 实时荧光定量, 反转录聚合酶链反应, c-myc基因

Abstract: Objective To construct the recombinant plasmid and standard curve for detection of c-myc gene by real-time quantitative PCR(FQ-PCR) using SYBR GreenⅠ and establish the FQ-PCR assay for accurate detection of c-myc gene. Methods The c-myc cDNA was acquired by reverse transcriptase polymerase chain reaction(RT-PCR) after isolating total RNA from tissue of human esophageal squamous cell carcinoma(ESCC). The purified product of PCR was subsequently ligated with pGEM-T Easy vector and transferred into bacterium DH-5α. The recombinant plasmid picked out from positive clones was amplified by PCR, digested with restriction endonuclear EcoRⅠ and sequenced. The mass concentration of the recombinant plasmid was measured and transformed to copy concentration. Then the recombinant plasmid was diluted to series standard concentration and amplified by FQ-PCR. Results That c-myc recombined with pGEM-T Easy vector was proved by digestion and PCR amplification and sequence analysis. The standard curve for detection of c-myc gene was constructed with good correlation with Ct(cycle threshold), the correlation coefficient(2) ranged from -0.99 to -1.00, the slope ranged from -3.1 to -3.6. Conclusion The recombinant plasmid and standard curve to detect the c-myc gene by SYBR GreenⅠ approach was good in sensitivity, specificity and linear function. It can be used as a standard method of FQ-PCR for detection of c-myc gene.

Key words: SYBR GreenⅠ, real-time quantitative, reverse transcriptase polymerase chain reaction, c-myc gene

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